Journal: Frontiers in Genetics

Article Title: Mucin glycan foraging in the human gut microbiome

doi: 10.3389/fgene.2015.00081

Figure Lengend Snippet: Mucin-degrading bacteria colonizing the human GI tract .

Article Snippet: Transcriptional data suggest that GH29 and GH95 fucosidases play a key role in the ability of B. thetaiotaomicron VPI-5482 (Martens et al., ), B. longum subspecies infantis ATCC 15697 (Sela et al., ), B. bifidum JCM 1254 (Ashida et al., ), and R. gnavus ATCC 29149 (Crost et al., ) to utilize mucins as a source of carbon.

Techniques: Purification, Activity Assay

Journal: Cellular and Molecular Gastroenterology and Hepatology

Article Title: Enterococcus faecalis Glucosamine Metabolism Exacerbates Experimental Colitis

doi: 10.1016/j.jcmgh.2021.06.017

Figure Lengend Snippet: Bacterial Strains Used in the Current Studies

Article Snippet: Ruminococcus gnavus , ATCC 29149 , Human feces.

Techniques:

Journal:

Article Title: Ruminococcin A, a New Lantibiotic Produced by a Ruminococcus gnavu s Strain Isolated from Human Feces

doi: 10.1128/AEM.67.9.4111-4118.2001

Figure Lengend Snippet: Bacterial strains: sensitivity to RumA and metronidazole a

Article Snippet: Other strains were from culture collections: ATCC (American Type Culture Collection, Manassas, Va.), CIP (Collection Institut Pasteur, Paris, France), NCTC (National Collection of Type Cultures, London, United Kingdom), and VPI (Virginia Polytechnic Institute, Blacksburg). table ft1 table-wrap mode="anchored" t5 TABLE 1 caption a7 Species Strain Culture medium MIC (μg/ml) of agent: Prepurified RumA Metronidazole Bacteroides putredenis ATCC 29800 BHI-YH NI ∗ 3.0 Bacteroides thetaiotaomicron ATCC 29148 BHI-YH NI ∗ 12.5 Bacteroides vulgatus ATCC 8482 BHI-YH 600 12.5 Bacteroides fragilis ATCC 25285 BHI-YH NI ∗ NI ∗∗ Bifidobacterium adolescentis ATCC 15703 BHI-YH 150 NI ∗∗ Bifidobacterium breve ATCC 15700 BHI-YH 300 NI ∗∗ Bifidobacterium catenulatum ATCC 27539 BHI-YH 150 NI ∗∗ B. longum ATCC 15707 BHI-YH 75 NI ∗∗ Enterococcus faecalis CIP 76117 BHI-YH NI ∗ NT Eubacterium contortum ATCC 25540 BHI-YH 32.5 1.5 Ruminococcus obeum ATCC 29174 BHI-YH 32.5 1.5 R. torques ATCC 27756 BHI-YH 300 NT R. gnavus ATCC 29149 BHI-YH 75 12.5 C. nexile ATCC 27757 BHI-YH 150 3.0 C. oroticum ATCC 13619 BHI-YH 600 6.25 C. perfringens CpA BHI-YH 75 25 C. difficile serogroup A B-1 BHI-YH 75 6.25 C. difficile serogroup C C253 BHI-YH 75 6.25 C. difficile serogroup D ATCC 43598 BHI-YH 150 6.25 C. difficile serogroup F M-1 BHI-YH 150 12.5 C. difficile serogroup S3 79685 BHI-YH 75 6.25 C. difficile ATCC 43255 BHI-YH 150 6.25 C. botulinum type A CIP 38 TGY 75 NT C. botulinum type B NCTC 7273 TGY 75 NT C. botulinum type E NCTC 8266 TGY 75 NT C. sordellii VPI 9048 BHI-YH 150 NT C. bifermentans NCTC 506 BHI-YH 75 NT C. septicum ATCC 12464 BHI-YH 150 NT C. sporogenes ATCC 19404 BHI-YH 300 NT B. cereus Z4222, TZ415 J agar 75 NT B. cereus Z4234, K1231, P2101 J agar 150 NT B. cereus K1166, L2104, P2174, Z421, P21S J agar NI ∗ NT Open in a separate window a In this test, a Sep-pack-purified RumA containing 600 μg of total protein per ml was used.

Techniques: